Profile

Bonnie Hurwitz

Biosystems Engineering-Res

Full Page

Overview

Research

Collaboration(41)

Page 1 of 9

Research Opportunities(2)

Undergrad Research Opp Paid, Volunteer, For Credit
metagenomics, genomics, microbes, viruses, bioinformatics, computing, big data, high performance computing Prerequisite Courses: programming skills are useful Majors: computer science, biological sciences, and statistics
Undergrad Research Opp Paid, Volunteer, For Credit
metagenomics, genomics, microbes, viruses, bioinformatics, computing, big data, high performance computing Prerequisite Courses: programming skills are useful Majors: computer science, biological sciences, and statistics

Grants(14)

Leveraging the Microbiome, Local Admixture, and Machine Learning to Optimize Anticoagulant Pharmacogenomics in Medically Underserved Patients
Active·2021·$82.3K / $1.8M·
External
Co-Investigator (COI)
microbiome, pharmacogenomics, machine learning, anticoagulant, medically underserved patients
NRT-URoL: BRIDGES - Building Resources for InterDisciplinary training in Genomic and Ecosystem Sciences
Active·2020·$301.3K / $3M·
External
Co-Investigator (COI)
genomics, ecosystems, interdisciplinary, training, resources
I-Corps: Rapid Home Microbiome Diagnostics Tests
2020·$40K / $50K·
External
Principal Investigator (PI)
microbiome, diagnostics, home testing, i-corps, rapid tests
Harmonizing Marine Microbiome Datasets with Ontology Standards and Infrastructure for the National Microbiome Data Collaborative
2019·$260.3K·
External
Principal Investigator (PI)
marine microbiome, ontology standards, data infrastructure, national collaborative, data harmonization
Metagenomic and Metabolomic Analysis of the Structure and Function of the Human Gut Microbiome in Congenital Heart
2019·$7.7K / $153.5K·
External
Co-Investigator (COI)
microbiome, metagenomics, metabolomics, gut, congenital heart

Page 1 of 3

Publications(55)

Recent

Evaluation of computational phage detection tools for metagenomic datasets

2023

phage detection, metagenomic analysis, computational tools, evaluation, bioinformatics

Comparison of k-mer-based comparative metagenomic tools and approaches

2023

metagenomics, bioinformatics, genomics, computational biology, microbiome

Ontology-driven analysis of marine metagenomics: what more can we learn from our data?

2022

marine metagenomics, ontology-driven analysis, data interpretation, biological diversity, research methodologies

Network analysis reveals dysregulated functional patterns in type II diabetic skin

2022

network analysis, type ii diabetes, skin, functional patterns, dysregulated

Ontology-Enriched Specifications Enabling Findable, Accessible, Interoperable, and Reusable Marine Metagenomic Datasets in Cyberinfrastructure Systems

2021

marine metagenomics, ontology, cyberinfrastructure, data accessibility, interoperability

Cyanolichen microbiome contains novel viruses that encode genes to promote microbial metabolism

2021

microbiome, viral ecology, microbial metabolism, virus-host interactions, genomic evolution

Planet Microbe: a platform for marine microbiology to discover and analyze interconnected omics and environmental data

2021

marine microbiology, omics data, environmental data, microbial ecology, bioinformatics analysis

An adaptable and non-invasive method for tracking Bifidobacterium animalis subspecies lactis 420 in the mouse gut

2021

microbiome, gut health, probiotics, animal studies, microbial tracking

Role of the gut microbiome in cardiovascular drug response: The potential for clinical application

2021

microbiome, cardiovascular, drug response, clinical application, gut

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshoand Follow-On Activities

2021

microbiome, metadata standards, national, data collaborative, workshop

People

Profile

Bonnie Hurwitz

Collaboration(41)

Sanlyn Buxner

Scott Saleska

David Besselsen

Marlys Witte

Bryan Heidorn

Research Opportunities(2)

Undergrad Research Opp Paid, Volunteer, For Credit

Undergrad Research Opp Paid, Volunteer, For Credit

Grants(14)

Leveraging the Microbiome, Local Admixture, and Machine Learning to Optimize Anticoagulant Pharmacogenomics in Medically Underserved Patients

NRT-URoL: BRIDGES - Building Resources for InterDisciplinary training in Genomic and Ecosystem Sciences

I-Corps: Rapid Home Microbiome Diagnostics Tests

Harmonizing Marine Microbiome Datasets with Ontology Standards and Infrastructure for the National Microbiome Data Collaborative

Metagenomic and Metabolomic Analysis of the Structure and Function of the Human Gut Microbiome in Congenital Heart

Publications(55)

Evaluation of computational phage detection tools for metagenomic datasets

Comparison of k-mer-based comparative metagenomic tools and approaches

Ontology-driven analysis of marine metagenomics: what more can we learn from our data?

Network analysis reveals dysregulated functional patterns in type II diabetic skin

Ontology-Enriched Specifications Enabling Findable, Accessible, Interoperable, and Reusable Marine Metagenomic Datasets in Cyberinfrastructure Systems

Cyanolichen microbiome contains novel viruses that encode genes to promote microbial metabolism

Planet Microbe: a platform for marine microbiology to discover and analyze interconnected omics and environmental data

An adaptable and non-invasive method for tracking Bifidobacterium animalis subspecies lactis 420 in the mouse gut

Role of the gut microbiome in cardiovascular drug response: The potential for clinical application

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshoand Follow-On Activities